Source: sniffles
Maintainer: Debian Med Packaging Team <debian-med-packaging@lists.alioth.debian.org>
Uploaders: Afif Elghraoui <afif@debian.org>
Section: science
Priority: optional
Build-Depends:
	debhelper (>= 10),
	cmake,
	libbamtools-dev,
	libtclap-dev,
	zlib1g-dev,
	pandoc <!nodoc>,
Standards-Version: 4.2.1
Vcs-Browser: https://salsa.debian.org/med-team/sniffles
Vcs-Git: https://salsa.debian.org/med-team/sniffles.git
Homepage: http://fritzsedlazeck.github.io/Sniffles

Package: sniffles
Architecture: any
Depends:
	${shlibs:Depends},
	${misc:Depends},
Suggests:
	bwa,
Description: structural variation caller using third-generation sequencing
 Sniffles is a structural variation (SV) caller using third-generation
 sequencing data such as those from Pacific Biosciences or Oxford
 Nanopore platforms.  It detects all types of SVs using evidence from
 split-read alignments, high-mismatch regions, and coverage analysis.
